BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C05LP1|AL427594
(209 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 331 3e-91
>3x_Contig1781
Length = 20717
Score = 331 bits (165), Expect = 3e-91
Identities = 180/186 (96%), Gaps = 1/186 (0%)
Strand = Plus / Plus
Query: 16 gcatcatgcanatatcggcg-atccttacctggttccatgcccccattttcaagagagtt 74
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 17005 gcatcatgcagatatcggcggatccttacctggttccatgcccccattttcaagagagtt 17064
Query: 75 gtacgaggaaggtgccgccatatacagtgagaagttggwagaagatggtatattygacga 134
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 17065 gtacgaggaaggtgccgccatatacagtgagaagttggtagaagatggtatattcgacga 17124
Query: 135 agcgaaattygtcaaattgtttttcgatgaaccggcacagtaccctggttgtagtgggtc 194
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17125 agcgaaagtcgtcaaattgtttttcgatgaaccggcacagtaccctggttgtagtgggtc 17184
Query: 195 gcgtaa 200
||||||
Sbjct: 17185 gcgtaa 17190
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 711
Number of Sequences: 1807
Number of extensions: 711
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 209
length of database: 10,358,551
effective HSP length: 15
effective length of query: 194
effective length of database: 10,331,446
effective search space: 2004300524
effective search space used: 2004300524
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.9 bits)